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GrainGenes Marker Report: ABC303

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Locus
ABC303
Type
RFLP
Synonym
SynonymABC303
Chromosome
4H
Chromosome Arm
4HS
Map
Barley-Consensus-4H-7
[ Show all 21 ]
[ Show Nearby Loci ]
QTL with Locus Marker
MetaQ.FHB_4H_4
Map Data
[ Hide all but 1 of 21 ]
Barley consensus
Barley consensus 2
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, BinMap 2005
Barley, Consensus 2005, SNP
Barley, Consensus 2006, DArT
Barley, Consensus 2006, Marcel
Barley, Consensus 2007, SSR
Barley, Consensus 2023, FHB
Barley, Integrated, Marcel 2009
Barley, KxM
Barley, OWB
Barley, OWB, 2004
Barley, OWB, 2005
Barley, OWB, OPA2008
Barley, OWB, SNP
Barley, Steptoe x Morex, SNP
Barley, SxM
Barley, SxM, Feed QTLs
Barley, Zhedar2, FHB QTL
Species
Hordeum vulgare
Probe
ABC303
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Remark
Number of populations contributing to the placement of ABC303 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABC303-4H
Xabc303-2B
Xabc303-6B



Probe
ABC303
Locus
ABC303
Xabc303-2B
Xabc303-6B
ABC303-4H
External Databases
DDBJ
EMBL
GenBank
Type
cDNA
STS
PCR primers
CTTTACAGCGACGAGACCAG
GAGGCTGTTATTATCTTACC
Sequence
L43944
ABC303
Source Species
Hordeum vulgare