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GrainGenes Marker Report: ABC261

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Locus	ABC261
Type	RFLP STS
Synonym	Synonym Blp (Hordeum)
Chromosome	1H
Chromosome Arm	1HL
Map	[ Hide all but 1 of 27 ] Barley-Consensus-1H 100.5 Barley-Consensus2-1H 138.6 Barley-ConsensusFHB-1H 137.9 Hordeum-AxK-1H 133.8 Hordeum-Bins-1H 145 Hordeum-Consensus2005-SNP-1H 136.854 Hordeum-Consensus2006-DArT-1H 134 Hordeum-Consensus2007-SSR-1H 125.88 Hordeum-Genes-1H -50.1 Hordeum-HxT-base-1H 143.7 Hordeum-NABGMP1-1H 137.9 Hordeum-NABGMP2-1H 138.5 Hordeum-OPA-2009-1H 186.13 Hordeum-OWB-1H 120.8 Hordeum-OWB-2004-1H 122.2 Hordeum-OWB-2005-1H 119.2 Hordeum-OWB-OPA2008-1H 142.047 Hordeum-OWB-SNP-1H 118.82 Hordeum-PilotOPA1-1H 129.036 Hordeum-QTLConsensus-Abiotic-1H 136.85 Hordeum-QTLConsensus-Agronomic-1H 136.85 Hordeum-StMo-SNP-1H 145.5 Hordeum-SxM-base-1H 139.1 Hordeum-SxM-FeedQTL-1H 137.9 Hordeum-SxM-SSAP-1H 132.6 Hv-Consensus2006-Marcel-1H 125.88 Hv-Integrated2009-1H 127.8
	[ Show Nearby Loci ]
QTL with Locus Marker	QSsg.HaTR-1H
Map Data	Barley consensus [ Show all 27 ]
Species	Hordeum vulgare
Probe	ABC261
Associated Gene	Blp (Hordeum)
Gene Class	Black lemma and pericarp
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 7 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of ABC261 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	Xabc261
Gene Associated with Locus	Blp (Hordeum)
Full Name	Black lemma and pericarp
Synonym	Synonym B von Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
Gene Class	Black lemma and pericarp
Allele	Blp (Hordeum) blp (Hordeum)
Locus	ABC261 Blp mB
Chromosome	1H
Image	Barley, Blp (black head) phenotype.1 Barley, Blp (black head) phenotype.2 Barley, blp (non-black head) phenotype
Data Source	Franckowiak, Jerome D. 96.10
Probe	ABC261
Locus	ABC261 HI057G22 HD008L1 Xabc261 ABC261-1H
External Databases	DDBJ EMBL GenBank
Type	cDNA STS
PCR primers	AGGAAGCTCAAGAAGGTGAA AAAGTCAAGAGTTGCATCAA
Sequence	L43942 ABC261
Source Species	Hordeum vulgare