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GrainGenes Marker Report: ABC174

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Locus	abc174
Type	RFLP
Synonym	Synonym abc174
Chromosome	3H
Chromosome Arm	3HL
Map	Barley-Consensus-3H 77 [ Show all 19 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QHd.DiMo-3H QS/T.DiMo-3H
Map Data	3B Physical [ Show all 21 ]
Species	Hordeum vulgare
Probe	ABC174
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Choi DW et al. (2000) Map locations of barley Dhn genes determined by gene-specific PCR Theoretical and Applied Genetics 101:350-354.
Data Source	Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka In the Bowman-BC x Calicuchima-sib maps, this locus was originally assigned to a second linkage group on 3H. The distance between ABG453 and ABG4 is an average of 31.2 in the 3 GrainGenes maps containing these loci, and the linkage groups were combined at a distance of 31.2 cM. Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	Xabc174-3 [ Show all 6 ]
Probe	ABC174
Locus	[ Hide all but 1 of 8 ] Xabc174-3D Xabc174-3B abc174 Xabc174-3 Xabc174a Xabc174b ABC174-3H Xabc174-3U
Synonym	Synonym HAR35_20307 HAR35_4197
Type	cDNA
Sequence	BQ548058 ABC174-5
Polymorphism	ABC174 EcoRV ABC174 EcoRI ABC174 HindIII ABC174 DraI ABC174 XbaI
Linkage Group	3
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	malt
Insert Size	0.8