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GrainGenes Marker Report: ABC172

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Locus	ABC172
Type	RFLP
Synonym	Synonym ABC172
Chromosome	3H
Chromosome Arm	3HL
Map	Barley-Consensus-3H 101.6 [ Show all 28 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	MetaQ.DON_3H_7 MetaQ.FHB_3H_9 QHd.HaTR-3H
Map Data	Barley consensus [ Show all 28 ]
Species	Hordeum vulgare
Probe	ABC172
Reference	[ Hide all but 1 of 8 ] Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027. Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of ABC172 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABC172-3H [ Show all 14 ]
Probe	ABC172
Locus	ABC172B [ Show all 14 ]
Type	cDNA
Sequence	BQ548056 ABC172-5
Polymorphism	ABC172 DraI ABC172 EcoRI ABC172 EcoRV ABC172 HindIII ABC172 XbaI
Linkage Group	3
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	malt
Insert Size	0.4