Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: ABC172

[Submit comment/correction]

Locus	ABC172
Type	RFLP
Synonym	Synonym ABC172
Chromosome	3H
Chromosome Arm	3HL
Map	[ Hide all but 1 of 28 ] Barley-Consensus-3H 101.6 Barley-Consensus2-3H 131.4 Barley-ConsensusFHB-3H 178.19 Hordeum-Bins-3H 181.4 Hordeum-Consensus2005-SNP-3H 161.867 Hordeum-Consensus2006-DArT-3H 181.3 Hordeum-Consensus2007-SSR-3H 157.51 Hordeum-FxS-FHB-QTL-3H 177.8 Hordeum-HxT-base-3H 154.3 Hordeum-NABGMP1-3H 205 Hordeum-NABGMP2-3H 107.8 Hordeum-OPA-2009-3H 262.03 Hordeum-OWB-2004-3H 182.4 Hordeum-OWB-2005-3H 212.2 Hordeum-OWB-3H 202 Hordeum-OWB-OPA2008-3H 206.905 Hordeum-OWB-SNP-3H 220.4 Hordeum-PilotOPA1-3H 167.55 Hordeum-QTLConsensus-Abiotic-3H 161.87 Hordeum-QTLConsensus-Agronomic-3H 161.87 Hordeum-StMo-SNP-3H 161.98 Hordeum-SxM-base-3H 185 Hordeum-SxM-FeedQTL-3H 205 Hordeum-SxM-SSAP-3H 175.1 Hordeum-SxM-SSR-3H 220.2 Hordeum-Zhedar2-FHB-QTL-3H 177.8 Hv-Consensus2006-Marcel-3H 157.51 Hv-Integrated2009-3H 167.8
	[ Show Nearby Loci ]
QTL with Locus Marker	MetaQ.DON_3H_7 MetaQ.FHB_3H_9 QHd.HaTR-3H
Map Data	Barley consensus [ Show all 28 ]
Species	Hordeum vulgare
Probe	ABC172
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 8 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of ABC172 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABC172-3H [ Show all 14 ]
Probe	ABC172
Locus	ABC172B [ Show all 14 ]
Type	cDNA
Sequence	BQ548056 ABC172-5
Polymorphism	ABC172 DraI ABC172 EcoRI ABC172 EcoRV ABC172 HindIII ABC172 XbaI
Linkage Group	3
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	malt
Insert Size	0.4