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GrainGenes Marker Report: ABC170B

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Locus
ABC170B
Type
RFLP
Synonym
SynonymABC170
Chromosome
5H
6H
Chromosome Arm
5HL
Map
[ Hide all but 1 of 14 ]
Barley-Consensus2-6H74.1
Hordeum-Bins-6H82
Hordeum-Consensus2005-SNP-6H85.253
Hordeum-Consensus2007-SSR-6H75.26
Hordeum-HxM-base-5H115.7
Hordeum-NABGMP1-6H74.6
Hordeum-OPA-2009-6H119.4
Hordeum-PilotOPA1-6H82.3
Hordeum-QTLConsensus-Abiotic-6H85.25
Hordeum-QTLConsensus-Agronomic-6H85.25
Hordeum-StMo-SNP-6H76.36
Hordeum-SxM-FeedQTL-6H74.6
Hv-Consensus2006-Marcel-6H75.26
Hv-Integrated2009-6H75.7
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 14 ]
Species
Hordeum vulgare
Probe
ABC170
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABC170
ABC170A
ABC170b-6H
ABC170C
Xabc170


Probe for Locus
ABC170
Locus
Xabc170-2A
[ Show all 7 ]
Synonym
SynonymHAR35_41690
External Databases
DDBJ
EMBL
GenBank
General Remarks
Steptoe malt cDNA
Type
cDNA
STS
PCR primers
ACG GTT GCT GTG GGT GTG AT
AAC GAT ACA ATG ACC AGA GC
Sequence
L43936
ABC170
Linkage Group
Groups 6?
Source Species
Hordeum vulgare
Insert Size
0.3