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GrainGenes Marker Report: ABC168

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Locus	ABC168
Type	RFLP
Synonym	Synonym ABC168
Chromosome	5H
Chromosome Arm	5HL
Map	Barley-Consensus-5H 36.6 [ Show all 15 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	MetaQ.HD_5H_3
Map Data	[ Hide all but 1 of 17 ] Barley consensus Barley consensus 2 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Cali-sib x BowmanBC, QTL Barley, Consensus 2005, SNP Barley, Consensus 2006, Marcel Barley, Consensus 2023, FHB Barley, FxS, FHB QTL Barley, GxH Barley, Integrated, Marcel 2009 Barley, IxF Barley, physical Barley, Steptoe x Morex, SNP Barley, SxM Barley, SxM, Feed QTLs
Probe	ABC168
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Probe	ABC168
Locus	ABC168 HD021C10
Synonym	Synonym HAR35_5989
External Databases	DDBJ EMBL GenBank
Remarks	Steptoe malt cDNA
Type	cDNA STS
PCR primers	GTA AGA ACA AAA CCC AAA AC GGA GAC CCA GCG GAA GGA GA
STS primers	5' CCCGGTAACTACTTACACCG 5' CGTGGAGCTGGTGTGCGAGA
STS size	223
Amplification Conditions	STS annealing temperature 55-58 oC
Sequence	L43935 ABC168 ABC168-5
Linkage Group	Group 7
Source Species	Hordeum vulgare
Insert Size	0.2