Query (optional)   in Class  

GrainGenes Marker Report: ABC165

[Submit comment/correction]

Locus
ABC165
Type
RFLP
Synonym
SynonymABC165
Chromosome
2H
Chromosome Arm
2HL
Map
[ Hide all but 1 of 20 ]
Barley-consensus-2003-2H140.1
Barley-Consensus-2H61.8
Barley-Consensus2-2H136
Barley-ConsensusFHB-1H0
Barley-ConsensusFHB-2H135.23
Hordeum-Bins-2H150.3
Hordeum-Consensus2005-SNP-2H134.806
Hordeum-Consensus2006-DArT-2H146
Hordeum-CxH-2H195.05
Hordeum-CxS-2H185.67
Hordeum-GxH-2H242.65
Hordeum-HxM-base-2H154.4
Hordeum-NABGMP1-2H165.1
Hordeum-NABGMP2-2H223.4
Hordeum-OPA-2009-2H221.7
Hordeum-PilotOPA1-2H143.5
Hordeum-QTLConsensus-Abiotic-2H134.81
Hordeum-QTLConsensus-Agronomic-2H134.81
Hordeum-StMo-SNP-2H134.82
Hordeum-SxM-FeedQTL-2H165.1
[ Show Nearby Loci ]
QTL with Locus Marker
MetaQ.FHB_6H_13
QHt.StMo-2H.2
QLg.StMo-2H.2
Map Data
Barley consensus
[ Show all 19 ]
Probe
ABC165
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Langridge, Peter J.
Remark
Number of populations contributing to the placement of ABC165 in the Barley, Consensus 2006 DArT maps = 1
Possible Orthologs
ABC165-2H
ABC165A
ABC165C
ABC165D



Probe
ABC165
Locus
ABC165
ABC165C
ABC165D
ABC165A
ABC165-2H
External Databases
DDBJ
EMBL
GenBank
Remarks
Steptoe malt cDNA
Type
cDNA
STS
PCR primers
CAATGACTTCAAGGGGTCTG
TCCATACCATTCCCATCTAA
Sequence
L43932
Linkage Group
Group 2
2
Source Species
Hordeum vulgare
Source Germplasm
Steptoe (barley)
Source Tissue
malt
Insert Size
0.5