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GrainGenes Marker Report: ABC156d

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Locus	ABC156d
Type	RFLP
Synonym	Synonym ABC156
Chromosome	7H
Map	[ Hide all but 1 of 16 ] Barley-Consensus2-7H 59.6 Hordeum-Bins-7H 57.2 Hordeum-Consensus2005-SNP-7H 69.408 Hordeum-Consensus2006-DArT-7H 63.8 Hordeum-Graner2-7H 93.1 Hordeum-IxF-SSR-7H 32.3 Hordeum-NABGMP1-7H 61.6 Hordeum-QTLConsensus-Abiotic-7H 69.41 Hordeum-QTLConsensus-Agronomic-7H 69.41 Hordeum-StMo-SNP-7H 55.04 Hordeum-SxM-base-7H 63.3 Hordeum-SxM-FeedQTL-7H 61.6 Hordeum-SxM-SSAP-7H 55.9 Hordeum-SxM-SSR-7H 62.4 Hv-Consensus2006-Marcel-7H 62.09 Hv-Integrated2009-7H 64.4
	[ Show Nearby Loci ]
QTL with Locus Marker	QBgnm.StMo-7H.1 QBgsk.StMo-7H.1
Map Data	Barley consensus 2 [ Show all 16 ]
Probe	ABC156
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Data Source	Blake, Tom 05.04.19
Remark	Number of populations contributing to the placement of ABC156D in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs	ABC156 [ Show all 23 ]
Probe for Locus	ABC156
Locus	Sr33 [ Show all 25 ]
Synonym	Synonym HAR35_37808
General Remarks	Steptoe malt cDNA
Type	cDNA STS
STS primers	5' TTACGGGATCAAAGCTGAGGC 5' GACAAGCAACACCAACCAAGC
STS size	197
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	BQ548054 ABC156 ABC156-5
Polymorphism	ABC156 XbaI ABC156 EcoRI ABC156 EcoRV ABC156 HindIII ABC156 DraI
Linkage Group	Groups 2,3,1 2 3
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	malt
Insert Size	0.3